From: Gene expression analysis reveals diabetes-related gene signatures
Study | Dataset | Human pancreatic islets samples | Sample isolation method | Protocol design | |
---|---|---|---|---|---|
Total n° | Type | ||||
Doi: https://0-doi-org.brum.beds.ac.uk/10.1038/s42255-021-00420-9 | GSE164416 | 57 | 18 ND, 39 T2D | Laser capture microdissection | SMART-seq Illumina Hiseq 2500 or 500 |
Doi: https://0-doi-org.brum.beds.ac.uk/10.1074/jbc.M110.200295 | GSE25724 | 13 | 7 ND, 6 T2D | Collagenase digestion followed by density gradient purification | HG- U133A Affymetrix chips |
Doi: https://0-doi-org.brum.beds.ac.uk/10.1371/journal.pone.0011499 | GSE20966 | 20 | 10 ND, 10 T2D | Laser capture microdissection | DNA-Chip Analyzer |
Doi: https://0-doi-org.brum.beds.ac.uk/10.1007/s00125-017-4500-3 | GSE76894 | 103 | 84 ND, 19 T2D | Enzymatic digestion or laser capture microdissection | Affymetrix Human Genome U133 Plus 2.0 Array |
Doi: https://0-doi-org.brum.beds.ac.uk/10.1101/gr.212720.116 | GSE86473 | 8 | 5 ND, 3 T2D | Cultured and isolated via C1 integrated fluidic circuit | SMART-seq2 Illumina NextSeq500 |
Doi: https://0-doi-org.brum.beds.ac.uk/10.1016/j.cmet.2020.04.005 | GSE124742 | 6 | 3 ND, 3 T1D | Patch-seq and FACS | SMART-seq2 Illumina NextSeq500 or Novaseq platform |