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Table 3 Effect of single amino acid substitution on MAPK1 group III variants stabilitya

From: The complex impact of cancer-related missense mutations on the stability and on the biophysical and biochemical properties of MAPK1 and MAPK3 somatic variants

 

Tm (°C)

\(\Delta G^{{{\text{H}}_{{2}} {\text{O}}}}\)(kcal/mol)

m (kcal/mol/M)

[GdmCl]0.5 (M)

  

CD ([\(\Theta\)]222)

Fluorescence

(\(\overline{{\uplambda }}\))

CD ([\(\Theta\)]222)

Fluorescence

(\(\overline{{\uplambda }}\))

CD ([\(\Theta\)]222)

Fluorescence

(\(\overline{{\uplambda }}\))

NP-WT

55.0

2.51 ± 0.22

2.79 ± 0.16

0.91 ± 0.09

1.34 ± 0.08

2.76

2.08

P-WT

55.0

2.30 ± 0.16

2.88 ± 0.20

0.97 ± 0.07

1.19 ± 0.09

2.37

2.42

NP-E33Q

54.1

2.44 ± 0.14

3.33 ± 0.31

0.96 ± 0.06

1.97 ± 0.20

2.54

1.69

P-E33Q

59.0

2.22

7.18

2.98 ± 0.24

1.56 ± 0.10

2.86 ± 0.62

1.30 ± 0.11

1.42 ± 0.03

3.43 ± 0.05

2.29

NP-L121I

55.0

2.29 ± 0.14

3.27 ± 0.31

1.00 ± 0.07

1.41 ± 0.14

2.29

2.32

P-L121I

62.0

1.73 ± 0.11

2.82 ± 0.21

1.12 ± 0.07

1.46 ± 0.12

1.55

1.93

NP-L200F

54.0

2.27 ± 0.16

2.88 ± 0.16

0.96 ± 0.07

1.44 ± 0.08

2.36

2.00

P-L200F

56.1

2.15 ± 0.19

3.06 ± 0.30

0.97 ± 0.09

1.72 ± 0.18

2.20

1.77

NP-D235V

52.1

2.46 ± 0.16

2.48 ± 0.19

1.07 ± 0.08

1.15 ± 0.09

2.30

2.15

P-D235V

61.1

1.77 ± 0.11

2.41 ± 0.23

1.07 ± 0.07

1.10 ± 0.12

1.65

2.18

  1. aMelting temperatures (Tm) were obtained as described in Materials and Methods by continuously monitoring the molar ellipticity at 222 nm every 0.5 °C. GdmCl-induced unfolding equilibrium data were measured as described in Materials and Methods by monitoring the ellipticity at 222 nm ([Θ222]) and the fluorescence intensity-averaged emission wavelength (λ¯¯¯λ¯, Eq. (2)). ΔGH2O and m values were obtained from Eq. (3); [GdmCl]0.5 was calculated from Eq. (5). [Θ222] and ‾λ data were fitted to Eq. (4) for the 2-state unfolding or to Eq. (6), for the 3-state unfolding. Data are reported as the mean ± SE of the fit. All the measures were performed on the non-phosphorylated (NP-) and phosphorylated (P-) form of the proteins