From: Softwares and methods for estimating genetic ancestry in human populations
Software | Global/local estimation | Operating Environments | Link |
---|---|---|---|
STRUCTURE | Global | Windows/DOS/Linux/Solaris/Mac | |
frappe | Global | Windows/Linux/Mac | |
ADMIXTURE | Global | Linux/Mac | |
EIGENSTRAT/smartpca | Global | Linux | |
ipPCA/EigenDev | Global | Windows/Linux (MatLab) | |
GEMTools | Global | Windows/Linux | |
PLINK | Global | Windows/Linux/Mac/C/C++ | |
LAMP | Local and Global | Windows/Linux | |
SABER | Local and Global | Linux | |
HAPMIX | Local and Global | Unix/Linux/Windows | |
ANCESTRYMAP | Local and Global | Unix/Linux |