Table 1 List of programs that can be used for genotype imputation, together with citations and the websites from which they can be obtained

BEAGLE

3.0.2

http://www.stat.auckland.ac.nz/~browning/beagle/beagle.html

[6, 7]

IMPUTE

0.5.0

http://www.stats.ox.ac.uk/~marchim/software/gwas/impute.html

[1]

MACH

1.10.16

http://www.sph.umich.edu/csg/abecasis/MaCH/

[8]

PLINK

1.05

http://pngu.mgh.harvard.edu/~purcell/plink/

[9]

BIMBAM

0.99

http://stephenslab.uchicago.edu/software.html

[2]

FAMHAP

18

http://famhap.meb.uni-bonn.de/

[10]