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Figure 4 | Human Genomics

Figure 4

From: Gametic phase estimation over large genomic regions using an adaptive window approach

Figure 4

Global and local accuracies of ELB, PHASE (Ver. 1) and HTYPER in each of 100 datasets obtained by random pairings of 42 human male X chromosomes typed at 97 diallelic polymorphisms (predominantly single nucleotide polymorphisms). Datasets have been sorted by increasing values given by the ELB algorithm, separately for global and local accuracies. The mean values are reported within parentheses for each algorithm. ELB parameters: burn-in 300,000 steps; thinning interval 200; number of samples 10,000; α = 0.01; ε = 0.01; γ = 0.01. The one missing value for PHASE corresponds to an unexplained program crash. HTYPER results are those reported after 20 independent runs, as recommended by its authors.

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